Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015940307.1_cds_XP_016484588.1_75588
CDS Infomation

[gene=LOC107805112] [db_xref=GeneID:107805112] [protein=IQ domain-containing protein IQM1-like] [protein_id=XP_016484588.1] [location=complement(join(2473..2907,3020..3121,3206..3436,3543..3630,3720..3808,3929..3994,4092..4206,4295..4731))] [gbkey=CDS]
Sequence

ATGGGACTCTCTCTTTCAATACTCTTATCAGCATGGAATGAAATTCTAAGGCATAGTTAT
CTTATTTTTCCGGACACAATGGGAAGATCTATTGTCAGATCAGTAAGCATTGAGAGGAAA
AATGGAGAACTATCTTTGAGAAAACTCAGTTTCAAAGAAAAAGATGCTAAGAATGTTAGG
ATGTCTGATTACTCAGAAGAAAGTCCAAAATATGAGAAACAAAAGCTTAAAACTTGTACT
CCACTTAATAGTTTGGTTATTGACAATGGAAAAATGGATTCAGTACCAAGACTCTCAATT
CCAGAACCCTTTGTGTTCTCTTCTCCGCGACCTGTTACTGAGCTTGACGCTGCTGCGACT
AAGCTCCAGACGGTGTACAAGAGTTATAGGACAAGAAGGAACCTTGCTGATTGTGCTGTA
GTTGTTGAAGAGCTCTGGTGGAAGGCATTGGATTCTGCAGCTTTAAAACAAAGCTCTATA
TCGTTTTTTGATGTCAATAAACATGAAGCTGCGGTGTCACGTTGGTCACGCGCCAGAACA
CGAGCTGCTAAGGTAGGCAAAGGTTTATTGAAGGATGAAAAGGCTCAAAAACTGGCTCTA
CAACATTGGCTGGAAGCTATTGACCCACGTCATCGTTATGGGCATAACTTACACTTCTAC
TATGATGTATGGTCCAACAGCAAAAGCACCCAACCTTTCTTCTATTGGTTGGATGTGGGT
GATGGCAAAGAAGTAAATCTTGAGCGTTGTCAAAGAGTTGATTTGCAACGTCAATGCATC
AAGTATTTAGGACCTAAAGAAAGGGAAGCCTATGAAGTAATTGTGGAGGATGGCAAGTTA
GTTTATAAGCAAAGTGGGACGCTCTTGAATACAACAGAAGGATCGAAGTGGATTTTCGTT
CTTAGCACTTCAAGAACTCTTTATGTGGGAAAGAAAAAGAAGGGTGTTTTCCAACACTCT
AGTTTTCTATCCGGTGGTGCTACGACAGCAGCTGGTAGATTGGTTGCTCAGGACGGGATT
CTTGAGGCAATATGGCCATACAGTGGTCACTATCTTCCTACAGAAGATAATTTCAAGGAA
TTCATCAGTTTCCTTGAGGAGCACCATGTTGATTTGGCTAACGTTAAGAGATGTGCAATA
GATGATGATAGACCTTCATCTAACAAAGACATGGAGAAAACTTTATCACAAACTTGTGAT
GCAGATATAGCTAAGGACGATAGCCCGGGCAGTGATATGGCGAAAACAACTGCTCATCAA
GAAAATTTTGGGCCTACCGGCGAAGACCACACAGAGGCACCAGTTATTGACTTGACCAAG
CGTTTATCTTGTAAGTGGACAAGTGGAGTTGGTCCCCGCATTGGCTGTGTGAGAGACTAT
CCCATTGATCTTCAATCTCAGGCCCTTGAGAAAGTTAATCTTTCTCCAAGGGTTACATTG
TCTCAGCCCAAGAATTGTTATCCAATCCCTTCACCACGACCGAGCCCAAAAATTCGTGTC
TCGCCTAGGCTTGCATACATGGGACTTCCAAGCCCAAGGGTTTCTGTTACTAGTAGTACT
TAG

Peptide Sequence

PEP ID

XP_016484588.1
PEP Infomation

PREDICTED: IQ domain-containing protein IQM1-like [Nicotiana tabacum]
Sequence

MGLSLSILLSAWNEILRHSYLIFPDTMGRSIVRSVSIERKNGELSLRKLSFKEKDAKNVR
MSDYSEESPKYEKQKLKTCTPLNSLVIDNGKMDSVPRLSIPEPFVFSSPRPVTELDAAAT
KLQTVYKSYRTRRNLADCAVVVEELWWKALDSAALKQSSISFFDVNKHEAAVSRWSRART
RAAKVGKGLLKDEKAQKLALQHWLEAIDPRHRYGHNLHFYYDVWSNSKSTQPFFYWLDVG
DGKEVNLERCQRVDLQRQCIKYLGPKEREAYEVIVEDGKLVYKQSGTLLNTTEGSKWIFV
LSTSRTLYVGKKKKGVFQHSSFLSGGATTAAGRLVAQDGILEAIWPYSGHYLPTEDNFKE
FISFLEEHHVDLANVKRCAIDDDRPSSNKDMEKTLSQTCDADIAKDDSPGSDMAKTTAHQ
ENFGPTGEDHTEAPVIDLTKRLSCKWTSGVGPRIGCVRDYPIDLQSQALEKVNLSPRVTL
SQPKNCYPIPSPRPSPKIRVSPRLAYMGLPSPRVSVTSST

Transcript Sequence

Gene sequence data has not been registered.